Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.13■■□□□ 1.13
VPS16Q9H269 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VPS16Q9H269 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VPS16Q9H269 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS16Q9H269 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS16Q9H269 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
VPS16Q9H269 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
VPS16Q9H269 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VPS16Q9H269 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.12■■□□□ 1.13
VPS16Q9H269 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
VPS16Q9H269 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
VPS16Q9H269 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS16Q9H269 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.11■■□□□ 1.13
VPS16Q9H269 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
VPS16Q9H269 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
VPS16Q9H269 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.11■■□□□ 1.13
VPS16Q9H269 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.11■■□□□ 1.13
VPS16Q9H269 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VPS16Q9H269 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VPS16Q9H269 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
VPS16Q9H269 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS16Q9H269 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
VPS16Q9H269 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
VPS16Q9H269 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS16Q9H269 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.1■■□□□ 1.13
VPS16Q9H269 MYCNOS-205ENST00000641950 531 ntBASIC22.1■■□□□ 1.13
VPS16Q9H269 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 AC116562.4-201ENST00000641316 2276 ntBASIC22.1■■□□□ 1.13
VPS16Q9H269 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
VPS16Q9H269 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VPS16Q9H269 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
VPS16Q9H269 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS16Q9H269 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS16Q9H269 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS16Q9H269 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 BX119927.1-201ENST00000636596 1552 ntBASIC22.09■■□□□ 1.13
VPS16Q9H269 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
VPS16Q9H269 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.09■■□□□ 1.13
VPS16Q9H269 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.09■■□□□ 1.13
VPS16Q9H269 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.09■■□□□ 1.13
VPS16Q9H269 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
VPS16Q9H269 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.09■■□□□ 1.13
VPS16Q9H269 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VPS16Q9H269 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms