Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 AP002982.1-201ENST00000492365 877 ntBASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDH11XQ9BZA7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 AC079598.2-202ENST00000546624 1451 ntBASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDH11XQ9BZA7 PTBP1P-201ENST00000554374 1601 ntBASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 KRT8P9-201ENST00000558927 1449 ntBASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 UNC93B2-201ENST00000285383 730 ntBASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 AP000525.1-201ENST00000608286 694 ntBASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDH11XQ9BZA7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDH11XQ9BZA7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 AC092865.7-201ENST00000641832 219 ntBASIC26.31■■□□□ 1.8
PCDH11XQ9BZA7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 Z98882.1-201ENST00000622160 2253 ntBASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDH11XQ9BZA7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 HLA-G-202ENST00000376815 851 ntBASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 HLA-G-203ENST00000376818 1127 ntBASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 AL031963.3-201ENST00000606441 850 ntBASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDH11XQ9BZA7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 NIFKP9-201ENST00000419265 221 ntBASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 KRT18P35-201ENST00000510488 1269 ntBASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDH11XQ9BZA7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms