Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 AL390719.1-204ENST00000412397 1219 ntBASIC21.2■□□□□ 0.98
SMOQ99835 AC128676.1-201ENST00000454392 318 ntBASIC21.2■□□□□ 0.98
SMOQ99835 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.2■□□□□ 0.98
SMOQ99835 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.2■□□□□ 0.98
SMOQ99835 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.2■□□□□ 0.98
SMOQ99835 AC008687.6-201ENST00000596318 630 ntBASIC21.2■□□□□ 0.98
SMOQ99835 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.2■□□□□ 0.98
SMOQ99835 AC073648.6-201ENST00000641589 218 ntBASIC21.2■□□□□ 0.98
SMOQ99835 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.2■□□□□ 0.98
SMOQ99835 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.2■□□□□ 0.98
SMOQ99835 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMOQ99835 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.2■□□□□ 0.98
SMOQ99835 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMOQ99835 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SMOQ99835 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.19■□□□□ 0.98
SMOQ99835 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 PRORSD1P-201ENST00000295112 541 ntBASIC21.19■□□□□ 0.98
SMOQ99835 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.19■□□□□ 0.98
SMOQ99835 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 KRT18P29-201ENST00000397031 1267 ntBASIC21.19■□□□□ 0.98
SMOQ99835 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SMOQ99835 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.19■□□□□ 0.98
SMOQ99835 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.19■□□□□ 0.98
SMOQ99835 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMOQ99835 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.19■□□□□ 0.98
SMOQ99835 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
SMOQ99835 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.18■□□□□ 0.98
SMOQ99835 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.18■□□□□ 0.98
SMOQ99835 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.18■□□□□ 0.98
SMOQ99835 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SMOQ99835 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.18■□□□□ 0.98
SMOQ99835 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.18■□□□□ 0.98
SMOQ99835 AC233263.1-201ENST00000578059 224 ntBASIC21.18■□□□□ 0.98
SMOQ99835 AC120498.8-201ENST00000614275 531 ntBASIC21.18■□□□□ 0.98
SMOQ99835 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SMOQ99835 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMOQ99835 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.18■□□□□ 0.98
SMOQ99835 AC020907.5-201ENST00000624372 1936 ntBASIC21.17■□□□□ 0.98
SMOQ99835 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMOQ99835 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMOQ99835 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SMOQ99835 AL031963.3-201ENST00000606441 850 ntBASIC21.17■□□□□ 0.98
SMOQ99835 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.17■□□□□ 0.98
SMOQ99835 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 SMG8-203ENST00000578922 2178 ntBASIC21.17■□□□□ 0.98
SMOQ99835 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMOQ99835 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SMOQ99835 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SMOQ99835 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 FEM1AP1-201ENST00000431297 1995 ntBASIC21.16■□□□□ 0.98
SMOQ99835 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.16■□□□□ 0.98
SMOQ99835 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.16■□□□□ 0.98
SMOQ99835 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.16■□□□□ 0.98
SMOQ99835 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SMOQ99835 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SMOQ99835 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.16■□□□□ 0.98
SMOQ99835 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 POM121L13P-201ENST00000422362 380 ntBASIC21.16■□□□□ 0.98
SMOQ99835 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMOQ99835 AP005212.1-201ENST00000581547 1997 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms