Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
S1PR3Q99500 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.62■□□□□ 0.25
S1PR3Q99500 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.62■□□□□ 0.25
S1PR3Q99500 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
S1PR3Q99500 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
S1PR3Q99500 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
S1PR3Q99500 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.62■□□□□ 0.25
S1PR3Q99500 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
S1PR3Q99500 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.62■□□□□ 0.25
S1PR3Q99500 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 AL162377.1-201ENST00000618844 1793 ntBASIC16.61■□□□□ 0.25
S1PR3Q99500 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
S1PR3Q99500 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
S1PR3Q99500 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
S1PR3Q99500 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.61■□□□□ 0.25
S1PR3Q99500 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 IKBKGP1-201ENST00000612193 1073 ntBASIC16.61■□□□□ 0.25
S1PR3Q99500 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
S1PR3Q99500 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
S1PR3Q99500 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
S1PR3Q99500 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
S1PR3Q99500 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.61■□□□□ 0.25
S1PR3Q99500 PCDHAC2-203ENST00000615316 3011 ntBASIC16.61■□□□□ 0.25
S1PR3Q99500 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
S1PR3Q99500 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
S1PR3Q99500 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.61■□□□□ 0.25
S1PR3Q99500 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 AL137784.2-201ENST00000607332 1000 ntBASIC16.6■□□□□ 0.25
S1PR3Q99500 BID-214ENST00000617586 542 ntTSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 AC013268.1-206ENST00000638368 961 ntBASIC16.6■□□□□ 0.25
S1PR3Q99500 AC112229.1-201ENST00000639295 961 ntBASIC16.6■□□□□ 0.25
S1PR3Q99500 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
S1PR3Q99500 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.6■□□□□ 0.25
S1PR3Q99500 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
S1PR3Q99500 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.6■□□□□ 0.25
S1PR3Q99500 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
S1PR3Q99500 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.59■□□□□ 0.25
S1PR3Q99500 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
S1PR3Q99500 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 AC011767.1-201ENST00000617410 1153 ntBASIC16.59■□□□□ 0.25
S1PR3Q99500 AC092437.1-201ENST00000624794 1048 ntBASIC16.59■□□□□ 0.25
S1PR3Q99500 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.59■□□□□ 0.25
S1PR3Q99500 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
S1PR3Q99500 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
S1PR3Q99500 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.58■□□□□ 0.25
S1PR3Q99500 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
S1PR3Q99500 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
S1PR3Q99500 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
S1PR3Q99500 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
S1PR3Q99500 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.58■□□□□ 0.24
S1PR3Q99500 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
S1PR3Q99500 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.58■□□□□ 0.24
S1PR3Q99500 AL162412.1-201ENST00000567129 965 ntBASIC16.58■□□□□ 0.24
S1PR3Q99500 MFSD11-216ENST00000590393 1141 ntBASIC16.58■□□□□ 0.24
S1PR3Q99500 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
S1PR3Q99500 AC092666.2-201ENST00000613287 246 ntBASIC16.58■□□□□ 0.24
S1PR3Q99500 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
S1PR3Q99500 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms