Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.1■□□□□ 0.65
BBS4Q96RK4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.1■□□□□ 0.65
BBS4Q96RK4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 AL137784.2-201ENST00000607332 1000 ntBASIC19.1■□□□□ 0.65
BBS4Q96RK4 IKBKGP1-201ENST00000612193 1073 ntBASIC19.1■□□□□ 0.65
BBS4Q96RK4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BBS4Q96RK4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.1■□□□□ 0.65
BBS4Q96RK4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 AL162377.1-201ENST00000618844 1793 ntBASIC19.09■□□□□ 0.65
BBS4Q96RK4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 AC100791.3-201ENST00000617619 330 ntBASIC19.09■□□□□ 0.65
BBS4Q96RK4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 SMG8-203ENST00000578922 2178 ntBASIC19.09■□□□□ 0.65
BBS4Q96RK4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BBS4Q96RK4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.09■□□□□ 0.65
BBS4Q96RK4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BBS4Q96RK4 DPP3P2-201ENST00000416030 1696 ntBASIC19.08■□□□□ 0.65
BBS4Q96RK4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BBS4Q96RK4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BBS4Q96RK4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BBS4Q96RK4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BBS4Q96RK4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 AC004911.1-201ENST00000416316 871 ntBASIC19.08■□□□□ 0.64
BBS4Q96RK4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BBS4Q96RK4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BBS4Q96RK4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
BBS4Q96RK4 AL391422.3-201ENST00000603791 2761 ntBASIC19.08■□□□□ 0.64
BBS4Q96RK4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BBS4Q96RK4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 AC080038.1-201ENST00000611274 1154 ntBASIC19.07■□□□□ 0.64
BBS4Q96RK4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 AC092437.1-201ENST00000624794 1048 ntBASIC19.07■□□□□ 0.64
BBS4Q96RK4 AC138932.1-201ENST00000534164 6830 ntBASIC19.07■□□□□ 0.64
BBS4Q96RK4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BBS4Q96RK4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.07■□□□□ 0.64
BBS4Q96RK4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
BBS4Q96RK4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.06■□□□□ 0.64
BBS4Q96RK4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms