Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MS4A4EQ96PG1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MS4A4EQ96PG1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.83■□□□□ 0.6
MS4A4EQ96PG1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MS4A4EQ96PG1 AC010980.2-201ENST00000587099 1412 ntBASIC18.83■□□□□ 0.6
MS4A4EQ96PG1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 AL512625.2-201ENST00000417533 625 ntBASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 CDCA4P2-201ENST00000441182 718 ntBASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 AL589743.5-201ENST00000616611 1050 ntBASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 AL391422.3-201ENST00000603791 2761 ntBASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MS4A4EQ96PG1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 AC133552.2-202ENST00000575694 574 ntBASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MS4A4EQ96PG1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 MIR663A-201ENST00000385250 93 ntBASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 AL355472.2-201ENST00000422958 438 ntBASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 AC026185.1-201ENST00000445748 174 ntBASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MS4A4EQ96PG1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MS4A4EQ96PG1 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
MS4A4EQ96PG1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.78■□□□□ 0.6
MS4A4EQ96PG1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MS4A4EQ96PG1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
MS4A4EQ96PG1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MS4A4EQ96PG1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms