Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD4Q96DM1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PGBD4Q96DM1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PGBD4Q96DM1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 PRKY-204ENST00000533551 1019 ntBASIC21.89■■□□□ 1.09
PGBD4Q96DM1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 Z99916.2-201ENST00000604037 246 ntBASIC21.89■■□□□ 1.09
PGBD4Q96DM1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD4Q96DM1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 AC110285.5-201ENST00000611501 352 ntBASIC21.88■■□□□ 1.09
PGBD4Q96DM1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD4Q96DM1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 KRASP1-201ENST00000407852 552 ntBASIC21.87■■□□□ 1.09
PGBD4Q96DM1 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 MIR4497-201ENST00000583208 89 ntBASIC21.87■■□□□ 1.09
PGBD4Q96DM1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.87■■□□□ 1.09
PGBD4Q96DM1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PGBD4Q96DM1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 FEM1AP4-201ENST00000443167 1987 ntBASIC21.85■■□□□ 1.09
PGBD4Q96DM1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PGBD4Q96DM1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PGBD4Q96DM1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms