Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN23Q96B33 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN23Q96B33 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 WWOX-216ENST00000569818 525 ntBASIC20.28■□□□□ 0.84
CLDN23Q96B33 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLDN23Q96B33 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN23Q96B33 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLDN23Q96B33 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN23Q96B33 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLDN23Q96B33 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN23Q96B33 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN23Q96B33 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN23Q96B33 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.27■□□□□ 0.83
CLDN23Q96B33 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDN23Q96B33 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.27■□□□□ 0.83
CLDN23Q96B33 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 AC027702.1-201ENST00000563810 1770 ntBASIC20.26■□□□□ 0.83
CLDN23Q96B33 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN23Q96B33 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 AC006011.2-201ENST00000621313 1158 ntBASIC20.26■□□□□ 0.83
CLDN23Q96B33 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN23Q96B33 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN23Q96B33 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLDN23Q96B33 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLDN23Q96B33 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.25■□□□□ 0.83
CLDN23Q96B33 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN23Q96B33 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN23Q96B33 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN23Q96B33 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 MIR2861-201ENST00000636310 90 ntBASIC20.25■□□□□ 0.83
CLDN23Q96B33 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN23Q96B33 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN23Q96B33 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN23Q96B33 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN23Q96B33 LIN28AP1-201ENST00000429574 405 ntBASIC20.24■□□□□ 0.83
CLDN23Q96B33 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN23Q96B33 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.24■□□□□ 0.83
CLDN23Q96B33 AL031985.4-201ENST00000642138 673 ntBASIC20.24■□□□□ 0.83
CLDN23Q96B33 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN23Q96B33 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN23Q96B33 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CLDN23Q96B33 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CLDN23Q96B33 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.23■□□□□ 0.83
CLDN23Q96B33 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN23Q96B33 EGLN1P1-201ENST00000531623 762 ntBASIC20.23■□□□□ 0.83
CLDN23Q96B33 C2orf69P3-201ENST00000565542 1120 ntBASIC20.23■□□□□ 0.83
CLDN23Q96B33 AP005242.2-201ENST00000580065 1175 ntBASIC20.23■□□□□ 0.83
CLDN23Q96B33 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.23■□□□□ 0.83
CLDN23Q96B33 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 FSCN1P1-201ENST00000568912 1481 ntBASIC20.23■□□□□ 0.83
CLDN23Q96B33 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN23Q96B33 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN23Q96B33 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms