Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SPTSSAQ969W0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
SPTSSAQ969W0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 SLC25A24-204ENST00000569674 2357 ntBASIC17.66■□□□□ 0.42
SPTSSAQ969W0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 AC100791.3-201ENST00000617619 330 ntBASIC17.66■□□□□ 0.42
SPTSSAQ969W0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 DPP3P2-201ENST00000416030 1696 ntBASIC17.66■□□□□ 0.42
SPTSSAQ969W0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.66■□□□□ 0.42
SPTSSAQ969W0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 MCRIP2P1-201ENST00000394346 511 ntBASIC17.65■□□□□ 0.42
SPTSSAQ969W0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 AC007322.1-201ENST00000426983 750 ntBASIC17.65■□□□□ 0.42
SPTSSAQ969W0 CNN2P6-201ENST00000439038 900 ntBASIC17.65■□□□□ 0.42
SPTSSAQ969W0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 AC138932.1-201ENST00000534164 6830 ntBASIC17.65■□□□□ 0.42
SPTSSAQ969W0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SPTSSAQ969W0 SMG8-203ENST00000578922 2178 ntBASIC17.64■□□□□ 0.42
SPTSSAQ969W0 AC068338.2-201ENST00000563278 1430 ntBASIC17.64■□□□□ 0.42
SPTSSAQ969W0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SPTSSAQ969W0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 AC099778.1-201ENST00000568593 1911 ntBASIC17.64■□□□□ 0.41
SPTSSAQ969W0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SPTSSAQ969W0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 AC022517.1-201ENST00000592429 346 ntBASIC17.63■□□□□ 0.41
SPTSSAQ969W0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.63■□□□□ 0.41
SPTSSAQ969W0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.62■□□□□ 0.41
SPTSSAQ969W0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms