Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX1Q92499 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX1Q92499 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX1Q92499 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX1Q92499 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX1Q92499 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX1Q92499 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.53■■□□□ 1.04
DDX1Q92499 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.53■■□□□ 1.04
DDX1Q92499 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX1Q92499 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX1Q92499 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX1Q92499 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX1Q92499 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX1Q92499 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX1Q92499 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX1Q92499 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
DDX1Q92499 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX1Q92499 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
DDX1Q92499 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
DDX1Q92499 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 CYP2T3P-201ENST00000601990 817 ntBASIC21.52■■□□□ 1.04
DDX1Q92499 AC069236.1-201ENST00000604339 616 ntBASIC21.52■■□□□ 1.04
DDX1Q92499 OR10C1-204ENST00000622521 1039 ntBASIC21.52■■□□□ 1.04
DDX1Q92499 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX1Q92499 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
DDX1Q92499 TCF3P1-201ENST00000423021 1937 ntBASIC21.52■■□□□ 1.04
DDX1Q92499 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX1Q92499 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX1Q92499 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX1Q92499 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX1Q92499 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX1Q92499 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
DDX1Q92499 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX1Q92499 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX1Q92499 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
DDX1Q92499 AL355472.2-201ENST00000422958 438 ntBASIC21.51■■□□□ 1.03
DDX1Q92499 AC093787.1-201ENST00000450396 207 ntBASIC21.51■■□□□ 1.03
DDX1Q92499 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.51■■□□□ 1.03
DDX1Q92499 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.51■■□□□ 1.03
DDX1Q92499 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DDX1Q92499 AC010980.2-201ENST00000587099 1412 ntBASIC21.51■■□□□ 1.03
DDX1Q92499 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DDX1Q92499 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX1Q92499 PCDHAC2-203ENST00000615316 3011 ntBASIC21.51■■□□□ 1.03
DDX1Q92499 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
DDX1Q92499 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX1Q92499 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX1Q92499 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX1Q92499 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX1Q92499 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX1Q92499 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX1Q92499 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
DDX1Q92499 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
DDX1Q92499 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX1Q92499 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
DDX1Q92499 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX1Q92499 KRT18P68-201ENST00000392293 1000 ntBASIC21.5■■□□□ 1.03
DDX1Q92499 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
DDX1Q92499 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
DDX1Q92499 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.5■■□□□ 1.03
DDX1Q92499 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.5■■□□□ 1.03
DDX1Q92499 AC105020.6-201ENST00000621523 1217 ntBASIC21.5■■□□□ 1.03
DDX1Q92499 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX1Q92499 PTBP1P-201ENST00000554374 1601 ntBASIC21.5■■□□□ 1.03
DDX1Q92499 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX1Q92499 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX1Q92499 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX1Q92499 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
DDX1Q92499 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX1Q92499 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX1Q92499 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 AL512625.2-201ENST00000417533 625 ntBASIC21.49■■□□□ 1.03
DDX1Q92499 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.49■■□□□ 1.03
DDX1Q92499 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
DDX1Q92499 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX1Q92499 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.49■■□□□ 1.03
DDX1Q92499 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX1Q92499 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
DDX1Q92499 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX1Q92499 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX1Q92499 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX1Q92499 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
DDX1Q92499 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms