Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AC007663.1-201ENST00000438948 1240 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AC106028.4-201ENST00000614509 607 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 RER1-204ENST00000378518 522 ntTSL 3 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 AL031284.1-201ENST00000419297 478 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 MIR6089-201ENST00000616698 64 ntBASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
SYNE2Q8WXH0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC8.27□□□□□ -1.08
SYNE2Q8WXH0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.08
SYNE2Q8WXH0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
SYNE2Q8WXH0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
SYNE2Q8WXH0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC8.27□□□□□ -1.08
SYNE2Q8WXH0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 DNAJB3-202ENST00000449667 1266 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AC004967.1-201ENST00000453589 447 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MOK-208ENST00000519058 917 ntTSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MIR3687-2-201ENST00000577708 61 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AP002414.4-201ENST00000589764 1148 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MIR3687-1-201ENST00000614492 61 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AL121912.1-201ENST00000603683 238 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 B3GAT3P1-201ENST00000471720 806 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AC243732.1-201ENST00000612648 864 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AL590627.1-203ENST00000421194 1026 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC8.27□□□□□ -1.09
SYNE2Q8WXH0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC010501.1-201ENST00000606270 1962 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 GPX1P2-201ENST00000429271 606 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AC084346.2-201ENST00000607097 949 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 AL136038.4-201ENST00000603606 1261 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SYNE2Q8WXH0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms