Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRUB1Q8WWH5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 AC125437.2-201ENST00000625180 2167 ntBASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 AL158211.5-201ENST00000623583 2518 ntBASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 POU5F1P4-201ENST00000413175 1085 ntBASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 AC005332.8-201ENST00000622750 2735 ntBASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.44■□□□□ 0.54
TRUB1Q8WWH5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 MIR4767-201ENST00000582827 78 ntBASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 MIR2861-201ENST00000636310 90 ntBASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRUB1Q8WWH5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 AC008175.2-201ENST00000612840 297 ntBASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
TRUB1Q8WWH5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 AC007613.1-201ENST00000572811 2597 ntBASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRUB1Q8WWH5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms