Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC079834.2-201ENST00000609776 1949 ntBASIC20.29■□□□□ 0.84
HMGB4Q8WW32 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 AL121829.2-201ENST00000620908 328 ntBASIC20.29■□□□□ 0.84
HMGB4Q8WW32 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMGB4Q8WW32 AC027702.1-201ENST00000563810 1770 ntBASIC20.29■□□□□ 0.84
HMGB4Q8WW32 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC023632.3-201ENST00000521633 145 ntBASIC20.28■□□□□ 0.84
HMGB4Q8WW32 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 AC026471.5-201ENST00000615068 467 ntBASIC20.28■□□□□ 0.84
HMGB4Q8WW32 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HMGB4Q8WW32 HTR7P1-201ENST00000538670 1336 ntBASIC20.27■□□□□ 0.84
HMGB4Q8WW32 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 AC244015.2-201ENST00000616358 1861 ntBASIC20.27■□□□□ 0.84
HMGB4Q8WW32 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.27■□□□□ 0.84
HMGB4Q8WW32 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.27■□□□□ 0.84
HMGB4Q8WW32 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMGB4Q8WW32 CLDN5-201ENST00000403084 2357 ntBASIC20.27■□□□□ 0.83
HMGB4Q8WW32 KRT8P36-201ENST00000489121 1440 ntBASIC20.27■□□□□ 0.83
HMGB4Q8WW32 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HMGB4Q8WW32 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 NBPF21P-201ENST00000425093 1451 ntBASIC20.26■□□□□ 0.83
HMGB4Q8WW32 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 AP003071.4-201ENST00000562276 1284 ntBASIC20.26■□□□□ 0.83
HMGB4Q8WW32 AF186192.3-201ENST00000583427 947 ntBASIC20.26■□□□□ 0.83
HMGB4Q8WW32 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMGB4Q8WW32 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 AL355355.2-201ENST00000442321 338 ntBASIC20.25■□□□□ 0.83
HMGB4Q8WW32 KRT16P5-201ENST00000455284 522 ntBASIC20.25■□□□□ 0.83
HMGB4Q8WW32 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HMGB4Q8WW32 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms