Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AL121956.5-201ENST00000625261 221 ntBASIC21.27■■□□□ 1
PRUNE2Q8WUY3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.27■■□□□ 1
PRUNE2Q8WUY3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRUNE2Q8WUY3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.27■□□□□ 0.99
PRUNE2Q8WUY3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.27■□□□□ 0.99
PRUNE2Q8WUY3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 RN7SL510P-201ENST00000581311 263 ntBASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 CR769767.2-201ENST00000622735 460 ntBASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 KRT8P45-201ENST00000414328 1447 ntBASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRUNE2Q8WUY3 C2orf69P3-201ENST00000565542 1120 ntBASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 AL121829.2-201ENST00000620908 328 ntBASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 AC004264.1-201ENST00000608354 794 ntBASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRUNE2Q8WUY3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 NIFKP9-201ENST00000419265 221 ntBASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 AP005242.2-201ENST00000580065 1175 ntBASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 AC012313.10-201ENST00000623509 926 ntBASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRUNE2Q8WUY3 IER3-202ENST00000376377 1350 ntBASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 AC026271.3-201ENST00000571884 352 ntBASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.23■□□□□ 0.99
PRUNE2Q8WUY3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 AL138966.2-201ENST00000621997 464 ntBASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 EGLN1P1-201ENST00000531623 762 ntBASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRUNE2Q8WUY3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 CR392000.1-201ENST00000624770 1228 ntBASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRUNE2Q8WUY3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms