Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHROOM3Q8TF72 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AL138781.1-201ENST00000566567 1274 ntBASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AC091874.3-201ENST00000512672 1195 ntBASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 PCDHAC2-203ENST00000615316 3011 ntBASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHROOM3Q8TF72 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 AL691432.2-201ENST00000607222 2038 ntBASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 POU5F1P3-201ENST00000428824 1078 ntBASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.6■□□□□ 0.89
SHROOM3Q8TF72 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 TCF3P1-201ENST00000423021 1937 ntBASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHROOM3Q8TF72 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SHROOM3Q8TF72 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.58■□□□□ 0.88
SHROOM3Q8TF72 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHROOM3Q8TF72 BX119927.1-201ENST00000636596 1552 ntBASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.57■□□□□ 0.88
SHROOM3Q8TF72 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms