Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 AL158211.5-201ENST00000623583 2518 ntBASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB3IL1Q8TBN0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 AL139246.5-201ENST00000606645 996 ntBASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB3IL1Q8TBN0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 MIR638-201ENST00000385237 100 ntBASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAB3IL1Q8TBN0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 AC098818.2-201ENST00000564925 2320 ntBASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 AC245052.3-201ENST00000450182 901 ntBASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB3IL1Q8TBN0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB3IL1Q8TBN0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.02■□□□□ 0.79
RAB3IL1Q8TBN0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB3IL1Q8TBN0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms