Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.22■□□□□ 0.99
SHKBP1Q8TBC3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AC124016.1-201ENST00000609552 612 ntBASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 AL023875.1-201ENST00000640777 796 ntBASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SHKBP1Q8TBC3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SHKBP1Q8TBC3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 SNORA78-201ENST00000459373 127 ntBASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SHKBP1Q8TBC3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 AL390719.1-204ENST00000412397 1219 ntBASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.19■□□□□ 0.98
SHKBP1Q8TBC3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 AC133681.1-201ENST00000465482 601 ntBASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SHKBP1Q8TBC3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms