Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01560Q8TB33 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01560Q8TB33 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01560Q8TB33 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LINC01560Q8TB33 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC087499.1-201ENST00000418141 1075 ntBASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC023632.3-201ENST00000521633 145 ntBASIC17.51■□□□□ 0.39
LINC01560Q8TB33 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AL121829.2-201ENST00000620908 328 ntBASIC17.51■□□□□ 0.39
LINC01560Q8TB33 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01560Q8TB33 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 HTR7P1-201ENST00000538670 1336 ntBASIC17.5■□□□□ 0.39
LINC01560Q8TB33 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.5■□□□□ 0.39
LINC01560Q8TB33 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 NBPF21P-201ENST00000425093 1451 ntBASIC17.5■□□□□ 0.39
LINC01560Q8TB33 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01560Q8TB33 AC121338.2-201ENST00000622535 1744 ntBASIC17.5■□□□□ 0.39
LINC01560Q8TB33 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AL024507.2-201ENST00000606070 2574 ntBASIC17.49■□□□□ 0.39
LINC01560Q8TB33 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 AL117328.2-201ENST00000624617 1940 ntBASIC17.49■□□□□ 0.39
LINC01560Q8TB33 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LINC01560Q8TB33 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms