Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.77■□□□□ 0.12
LINC01006Q8NI28 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LINC01006Q8NI28 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LINC01006Q8NI28 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 FAM197Y1-201ENST00000421178 764 ntBASIC15.75■□□□□ 0.11
LINC01006Q8NI28 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 AC004264.1-201ENST00000608354 794 ntBASIC15.75■□□□□ 0.11
LINC01006Q8NI28 AL353708.3-201ENST00000610272 989 ntBASIC15.75■□□□□ 0.11
LINC01006Q8NI28 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
LINC01006Q8NI28 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 MMP23A-201ENST00000234610 1017 ntBASIC15.74■□□□□ 0.11
LINC01006Q8NI28 HLA-G-202ENST00000376815 851 ntBASIC15.74■□□□□ 0.11
LINC01006Q8NI28 HLA-G-203ENST00000376818 1127 ntBASIC15.74■□□□□ 0.11
LINC01006Q8NI28 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 AC073195.1-201ENST00000607241 877 ntBASIC15.74■□□□□ 0.11
LINC01006Q8NI28 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 AC121338.2-201ENST00000622535 1744 ntBASIC15.74■□□□□ 0.11
LINC01006Q8NI28 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LINC01006Q8NI28 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LINC01006Q8NI28 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms