Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 AC090192.1-201ENST00000517740 490 ntBASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 AIRN-201ENST00000601203 4374 ntBASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.22■□□□□ 0.67
SRFBP1Q8NEF9 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 DPP3P2-201ENST00000416030 1696 ntBASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 MIPEPP3-201ENST00000412105 444 ntBASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 TSPY6P-201ENST00000448518 926 ntBASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 C2orf69P4-201ENST00000565394 541 ntBASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.21■□□□□ 0.67
SRFBP1Q8NEF9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SRFBP1Q8NEF9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 MIR4758-201ENST00000577688 71 ntBASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SRFBP1Q8NEF9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 AC092118.2-201ENST00000613495 667 ntBASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SRFBP1Q8NEF9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms