Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 AL390719.1-204ENST00000412397 1219 ntBASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 AC026471.5-201ENST00000615068 467 ntBASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF248Q8NDW4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 MMP23A-201ENST00000234610 1017 ntBASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 AL049597.2-201ENST00000565575 961 ntBASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF248Q8NDW4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 AL355355.2-201ENST00000442321 338 ntBASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 AL353708.3-201ENST00000610272 989 ntBASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 AC006557.6-201ENST00000623071 864 ntBASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 AC116050.2-201ENST00000612102 1779 ntBASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF248Q8NDW4 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 AP003071.4-201ENST00000562276 1284 ntBASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF248Q8NDW4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF248Q8NDW4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 PGM5P4-201ENST00000421970 445 ntBASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 AC092865.7-201ENST00000641832 219 ntBASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF248Q8NDW4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms