Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 MIR2861-201ENST00000636310 90 ntBASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 AC006128.1-201ENST00000624704 1661 ntBASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00304Q8N9R0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 C2orf69P4-201ENST00000565394 541 ntBASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 MYC-209ENST00000641252 345 ntBASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 BCL2-203ENST00000589955 5011 ntBASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00304Q8N9R0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 PLK5-205ENST00000642079 1969 ntBASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 AC083880.1-201ENST00000608266 535 ntBASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00304Q8N9R0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 AC005229.4-201ENST00000610085 2198 ntBASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 KRT8P36-201ENST00000489121 1440 ntBASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00304Q8N9R0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms