Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 FAM21FP-204ENST00000608637 956 ntBASIC20.88■□□□□ 0.93
CCDC89Q8N998 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC89Q8N998 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC89Q8N998 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 CDV3P1-201ENST00000471403 739 ntBASIC20.87■□□□□ 0.93
CCDC89Q8N998 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC89Q8N998 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.87■□□□□ 0.93
CCDC89Q8N998 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 KRT8P36-201ENST00000489121 1440 ntBASIC20.86■□□□□ 0.93
CCDC89Q8N998 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC89Q8N998 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC89Q8N998 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 UBE2DNL-204ENST00000602536 740 ntBASIC20.85■□□□□ 0.93
CCDC89Q8N998 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC89Q8N998 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC89Q8N998 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.84■□□□□ 0.93
CCDC89Q8N998 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC89Q8N998 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.84■□□□□ 0.93
CCDC89Q8N998 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.84■□□□□ 0.93
CCDC89Q8N998 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC89Q8N998 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC89Q8N998 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC89Q8N998 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC89Q8N998 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC89Q8N998 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms