Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.45■■□□□ 1.02
TTC39CQ8N584 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TTC39CQ8N584 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 AL390719.1-204ENST00000412397 1219 ntBASIC21.44■■□□□ 1.02
TTC39CQ8N584 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.44■■□□□ 1.02
TTC39CQ8N584 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TTC39CQ8N584 AL162377.1-201ENST00000618844 1793 ntBASIC21.43■■□□□ 1.02
TTC39CQ8N584 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 AC005829.2-201ENST00000571422 1056 ntBASIC21.43■■□□□ 1.02
TTC39CQ8N584 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TTC39CQ8N584 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TTC39CQ8N584 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TTC39CQ8N584 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.42■■□□□ 1.02
TTC39CQ8N584 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.41■■□□□ 1.02
TTC39CQ8N584 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 AC092368.3-202ENST00000574180 1591 ntBASIC21.41■■□□□ 1.02
TTC39CQ8N584 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TTC39CQ8N584 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.41■■□□□ 1.02
TTC39CQ8N584 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.41■■□□□ 1.02
TTC39CQ8N584 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
TTC39CQ8N584 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TTC39CQ8N584 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TTC39CQ8N584 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.4■■□□□ 1.02
TTC39CQ8N584 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms