Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 KRT16P5-201ENST00000455284 522 ntBASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 AC023632.3-201ENST00000521633 145 ntBASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SYNPOQ8N3V7 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 RCN1P1-201ENST00000400413 996 ntBASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SYNPOQ8N3V7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 AL355355.2-201ENST00000442321 338 ntBASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 AP003071.4-201ENST00000562276 1284 ntBASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 AF186192.3-201ENST00000583427 947 ntBASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 CD177P1-201ENST00000606252 935 ntBASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SYNPOQ8N3V7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SYNPOQ8N3V7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 MMP23A-201ENST00000234610 1017 ntBASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 AL353708.3-201ENST00000610272 989 ntBASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 HTR7P1-201ENST00000538670 1336 ntBASIC20.53■□□□□ 0.88
SYNPOQ8N3V7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms