Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 AC091799.1-201ENST00000422823 811 ntBASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CDV3P1-201ENST00000471403 739 ntBASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC01561Q8N1V8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC01561Q8N1V8 AC027612.3-201ENST00000413684 1047 ntBASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 AP001160.3-201ENST00000601484 763 ntBASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 AL031432.3-201ENST00000607698 485 ntBASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC01561Q8N1V8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 RBM17P2-201ENST00000616397 1405 ntBASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC01561Q8N1V8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC01561Q8N1V8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms