Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC170Q8IYT3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
CCDC170Q8IYT3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC170Q8IYT3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC170Q8IYT3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC170Q8IYT3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.64■■□□□ 1.05
CCDC170Q8IYT3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 AC005332.7-201ENST00000614046 2005 ntBASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC170Q8IYT3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 TREX1-205ENST00000625293 1783 ntBASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 AC142381.2-201ENST00000566120 298 ntBASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC170Q8IYT3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 AC098818.2-201ENST00000564925 2320 ntBASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 AL139246.5-201ENST00000606645 996 ntBASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC170Q8IYT3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 AL020996.1-203ENST00000536896 2307 ntBASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC170Q8IYT3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CCDC170Q8IYT3 AC123595.1-201ENST00000440769 1046 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms