Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 AC083880.1-201ENST00000608266 535 ntBASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCUBE3Q8IX30 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 CD99P1-205ENST00000527459 561 ntBASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.21■□□□□ 0.99
SCUBE3Q8IX30 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 LINC01521-201ENST00000504184 1943 ntBASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCUBE3Q8IX30 AL391422.3-201ENST00000603791 2761 ntBASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 PTBP1P-201ENST00000554374 1601 ntBASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 AL162377.1-201ENST00000618844 1793 ntBASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCUBE3Q8IX30 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCUBE3Q8IX30 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms