Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM42Q8IWZ5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM42Q8IWZ5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 AC099791.1-201ENST00000416440 715 ntBASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 RARRES2P11-201ENST00000635158 484 ntBASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 RASA4CP-201ENST00000424092 1398 ntBASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM42Q8IWZ5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM42Q8IWZ5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM42Q8IWZ5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 ZNRF2P3-201ENST00000424200 374 ntBASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM42Q8IWZ5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM42Q8IWZ5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM42Q8IWZ5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM42Q8IWZ5 TNXA-203ENST00000507684 2038 ntBASIC20.02■□□□□ 0.79
TRIM42Q8IWZ5 AC005332.7-201ENST00000614046 2005 ntBASIC20.02■□□□□ 0.79
TRIM42Q8IWZ5 AP000974.1-201ENST00000623909 2387 ntBASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 AC116050.2-201ENST00000612102 1779 ntBASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 AC105265.2-201ENST00000467189 838 ntBASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM42Q8IWZ5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms