Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 AC098934.4-201ENST00000564127 592 ntBASIC18.87■□□□□ 0.61
CCDC71Q8IV32 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71Q8IV32 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.86■□□□□ 0.61
CCDC71Q8IV32 AC069152.1-201ENST00000438030 544 ntBASIC18.86■□□□□ 0.61
CCDC71Q8IV32 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 AC133552.2-202ENST00000575694 574 ntBASIC18.86■□□□□ 0.61
CCDC71Q8IV32 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 MIR4651-201ENST00000582622 73 ntBASIC18.86■□□□□ 0.61
CCDC71Q8IV32 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71Q8IV32 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 TERF1P5-201ENST00000477545 1207 ntBASIC18.85■□□□□ 0.61
CCDC71Q8IV32 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 EEF1DP3-203ENST00000566025 782 ntBASIC18.85■□□□□ 0.61
CCDC71Q8IV32 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 AC133041.1-202ENST00000642053 222 ntBASIC18.85■□□□□ 0.61
CCDC71Q8IV32 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71Q8IV32 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 AC013268.1-206ENST00000638368 961 ntBASIC18.84■□□□□ 0.61
CCDC71Q8IV32 AC112229.1-201ENST00000639295 961 ntBASIC18.84■□□□□ 0.61
CCDC71Q8IV32 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 TCF3P1-201ENST00000423021 1937 ntBASIC18.84■□□□□ 0.61
CCDC71Q8IV32 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC71Q8IV32 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC71Q8IV32 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 AC053503.5-201ENST00000601508 636 ntBASIC18.83■□□□□ 0.6
CCDC71Q8IV32 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC71Q8IV32 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms