Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 AC004264.1-201ENST00000608354 794 ntBASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NPAS4Q8IUM7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 MMP23A-201ENST00000234610 1017 ntBASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 RCN1P1-201ENST00000400413 996 ntBASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.73■■□□□ 1.07
NPAS4Q8IUM7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NPAS4Q8IUM7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 HLA-G-202ENST00000376815 851 ntBASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 HLA-G-203ENST00000376818 1127 ntBASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NPAS4Q8IUM7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NPAS4Q8IUM7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 AC121338.2-201ENST00000622535 1744 ntBASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NPAS4Q8IUM7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 AL117328.2-201ENST00000624617 1940 ntBASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 AP002982.1-201ENST00000492365 877 ntBASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPAS4Q8IUM7 AL049796.1-201ENST00000565336 1766 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms