Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CPNE8Q86YQ8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 BX119927.1-201ENST00000636596 1552 ntBASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 AC016769.1-201ENST00000409132 1010 ntBASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE8Q86YQ8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE8Q86YQ8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE8Q86YQ8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE8Q86YQ8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE8Q86YQ8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 AL355472.2-201ENST00000422958 438 ntBASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE8Q86YQ8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 KRT18P11-201ENST00000435214 1283 ntBASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 RARRES2P4-201ENST00000514074 484 ntBASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 AC092437.1-201ENST00000624794 1048 ntBASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE8Q86YQ8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 PTBP1P-201ENST00000554374 1601 ntBASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 AC004911.1-201ENST00000416316 871 ntBASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 CYP2T1P-201ENST00000432607 1285 ntBASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 IKBKGP1-201ENST00000612193 1073 ntBASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE8Q86YQ8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CPNE8Q86YQ8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms