Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TRIM50Q86XT4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 AC026310.3-201ENST00000625186 2373 ntBASIC22.55■■□□□ 1.2
TRIM50Q86XT4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM50Q86XT4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM50Q86XT4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 KRASP1-201ENST00000407852 552 ntBASIC22.53■■□□□ 1.2
TRIM50Q86XT4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRIM50Q86XT4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 MIR718-201ENST00000390190 70 ntBASIC22.52■■□□□ 1.2
TRIM50Q86XT4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 SNORA78-201ENST00000459373 127 ntBASIC22.52■■□□□ 1.2
TRIM50Q86XT4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM50Q86XT4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRIM50Q86XT4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM50Q86XT4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 AC133681.1-201ENST00000465482 601 ntBASIC22.5■■□□□ 1.19
TRIM50Q86XT4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM50Q86XT4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms