Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZC3HC1Q86WB0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.05■□□□□ 0.8
ZC3HC1Q86WB0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZC3HC1Q86WB0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 CNN2P6-201ENST00000439038 900 ntBASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.03■□□□□ 0.8
ZC3HC1Q86WB0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 DUX4L16-201ENST00000555130 1264 ntBASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZC3HC1Q86WB0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 AC026271.2-201ENST00000428091 497 ntBASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 RARRES2P4-201ENST00000514074 484 ntBASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms