Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ZNF546Q86UE3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 AC010141.3-201ENST00000456659 717 ntBASIC16.74■□□□□ 0.27
ZNF546Q86UE3 AL117332.1-201ENST00000622628 974 ntBASIC16.74■□□□□ 0.27
ZNF546Q86UE3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ZNF546Q86UE3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 MIR4787-201ENST00000607364 84 ntBASIC16.73■□□□□ 0.27
ZNF546Q86UE3 AC133637.1-201ENST00000624115 1537 ntBASIC16.73■□□□□ 0.27
ZNF546Q86UE3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ZNF546Q86UE3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 AC011484.1-201ENST00000377652 1995 ntBASIC16.72■□□□□ 0.27
ZNF546Q86UE3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.72■□□□□ 0.27
ZNF546Q86UE3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ZNF546Q86UE3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.71■□□□□ 0.27
ZNF546Q86UE3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms