Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 MYC-209ENST00000641252 345 ntBASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LYSMD3Q7Z3D4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 LINC01006-201ENST00000333319 2292 ntBASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LYSMD3Q7Z3D4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 AC097658.1-201ENST00000475555 843 ntBASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 AC083880.1-201ENST00000608266 535 ntBASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.24■□□□□ 0.83
LYSMD3Q7Z3D4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 DPP3P2-201ENST00000416030 1696 ntBASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
LYSMD3Q7Z3D4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.22■□□□□ 0.83
LYSMD3Q7Z3D4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LYSMD3Q7Z3D4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms