Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDHR3Q6ZTQ4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDHR3Q6ZTQ4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDHR3Q6ZTQ4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 DUX4L16-201ENST00000555130 1264 ntBASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDHR3Q6ZTQ4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 KRT16P2-201ENST00000414673 1423 ntBASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 CROCCP5-201ENST00000436658 830 ntBASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDHR3Q6ZTQ4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 AC245052.3-201ENST00000450182 901 ntBASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.19■□□□□ 0.82
CDHR3Q6ZTQ4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms