Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM88Q6PEY1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM88Q6PEY1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 SNX5-217ENST00000606557 1087 ntBASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM88Q6PEY1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 MIR6724-1-201ENST00000616420 92 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 MIR6724-2-201ENST00000616483 92 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 MIR6724-4-201ENST00000617390 92 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 MIR6724-3-201ENST00000622482 92 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 AIRN-201ENST00000601203 4374 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 AC007225.1-201ENST00000566331 1836 ntBASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.21■□□□□ 0.19
TMEM88Q6PEY1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TMEM88Q6PEY1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.21■□□□□ 0.18
TMEM88Q6PEY1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TMEM88Q6PEY1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms