Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 C2orf69P4-201ENST00000565394 541 ntBASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 MIR2861-201ENST00000636310 90 ntBASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFWD3Q6PCD5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21■□□□□ 0.95
RFWD3Q6PCD5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RFWD3Q6PCD5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21■□□□□ 0.95
RFWD3Q6PCD5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21■□□□□ 0.95
RFWD3Q6PCD5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
RFWD3Q6PCD5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFWD3Q6PCD5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RFWD3Q6PCD5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 AC006128.1-201ENST00000624704 1661 ntBASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RFWD3Q6PCD5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFWD3Q6PCD5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 FP700111.2-201ENST00000619190 1892 ntBASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 KRT8P36-201ENST00000489121 1440 ntBASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 FAM201B-201ENST00000458407 597 ntBASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 HLA-B-256ENST00000639848 1089 ntBASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms