Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNKSR3Q6P9H4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 FITM1-202ENST00000559294 800 ntBASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 CR392000.1-201ENST00000624770 1228 ntBASIC21.83■■□□□ 1.09
CNKSR3Q6P9H4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
CNKSR3Q6P9H4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CNKSR3Q6P9H4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CNKSR3Q6P9H4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CNKSR3Q6P9H4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNKSR3Q6P9H4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 KRT18P22-201ENST00000402024 1347 ntBASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 HLA-G-202ENST00000376815 851 ntBASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 HLA-G-203ENST00000376818 1127 ntBASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 NIFKP9-201ENST00000419265 221 ntBASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNKSR3Q6P9H4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 AL390955.1-201ENST00000428694 934 ntBASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 KRT18P57-201ENST00000443599 1254 ntBASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CNKSR3Q6P9H4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 CYP2D8P-201ENST00000433633 1490 ntBASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 AC010947.1-201ENST00000623454 693 ntBASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 KRT16P1-201ENST00000399124 1418 ntBASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNKSR3Q6P9H4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 TERF1P1-201ENST00000311003 1181 ntBASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 AL137013.1-201ENST00000432946 1228 ntBASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.79■■□□□ 1.08
CNKSR3Q6P9H4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms