Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC137630.3-201ENST00000607245 391 ntBASIC15.24■□□□□ 0.03
MRPL54Q6P161 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 AC093484.2-201ENST00000580996 2166 ntBASIC15.24■□□□□ 0.03
MRPL54Q6P161 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.24■□□□□ 0.03
MRPL54Q6P161 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
MRPL54Q6P161 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
MRPL54Q6P161 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
MRPL54Q6P161 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.22■□□□□ 0.03
MRPL54Q6P161 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.22■□□□□ 0.03
MRPL54Q6P161 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
MRPL54Q6P161 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
MRPL54Q6P161 LTB4R2-202ENST00000528054 3092 ntBASIC15.21■□□□□ 0.03
MRPL54Q6P161 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.21■□□□□ 0.03
MRPL54Q6P161 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MRPL54Q6P161 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MRPL54Q6P161 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
MRPL54Q6P161 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.21■□□□□ 0.02
MRPL54Q6P161 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MRPL54Q6P161 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MRPL54Q6P161 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
MRPL54Q6P161 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms