Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3F3CQ6NXT2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
H3F3CQ6NXT2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 AC006557.6-201ENST00000623071 864 ntBASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 RNF165-205ENST00000588679 2904 ntBASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H3F3CQ6NXT2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
H3F3CQ6NXT2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.64■□□□□ 0.58
H3F3CQ6NXT2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
H3F3CQ6NXT2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 C1QBPP2-201ENST00000528754 825 ntBASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H3F3CQ6NXT2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 PLK5-205ENST00000642079 1969 ntBASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 MTDHP1-201ENST00000605323 784 ntBASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H3F3CQ6NXT2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H3F3CQ6NXT2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms