Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC073314.1-201ENST00000568729 2216 ntBASIC21■□□□□ 0.95
TTC39BQ5VTQ0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TTC39BQ5VTQ0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 AC083880.1-201ENST00000608266 535 ntBASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
TTC39BQ5VTQ0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 MIR2861-201ENST00000636310 90 ntBASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TTC39BQ5VTQ0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 CD99P1-205ENST00000527459 561 ntBASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
TTC39BQ5VTQ0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TTC39BQ5VTQ0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms