Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 KRT18P48-201ENST00000434763 852 ntBASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC33.28■■■□□ 2.92
SNAPC4Q5SXM2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC33.27■■■□□ 2.92
SNAPC4Q5SXM2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 INGX-201ENST00000359239 846 ntBASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 EGLN1P1-201ENST00000531623 762 ntBASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 DGCR10-201ENST00000609839 495 ntBASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
SNAPC4Q5SXM2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC33.26■■■□□ 2.91
SNAPC4Q5SXM2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 SAPCD2P2-201ENST00000431719 1174 ntBASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 ABBA01031674.1-201ENST00000635145 728 ntBASIC33.25■■■□□ 2.91
SNAPC4Q5SXM2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC33.24■■■□□ 2.91
SNAPC4Q5SXM2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SNAPC4Q5SXM2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
SNAPC4Q5SXM2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 LINC01238-205ENST00000567549 1107 ntBASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
SNAPC4Q5SXM2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 C1QL1P1-201ENST00000568105 661 ntBASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 AP000550.4-202ENST00000639755 178 ntBASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
SNAPC4Q5SXM2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNAPC4Q5SXM2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNAPC4Q5SXM2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC33.2■■■□□ 2.91
SNAPC4Q5SXM2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC33.2■■■□□ 2.91
SNAPC4Q5SXM2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
SNAPC4Q5SXM2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
SNAPC4Q5SXM2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.9
SNAPC4Q5SXM2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 B3GAT3P1-201ENST00000471720 806 ntBASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 AC091390.4-202ENST00000476426 537 ntBASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SNAPC4Q5SXM2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
SNAPC4Q5SXM2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms