Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 HLA-G-202ENST00000376815 851 ntBASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 HLA-G-203ENST00000376818 1127 ntBASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 AL121906.2-201ENST00000621597 723 ntBASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRTCAP3Q53RY4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 NBPF21P-201ENST00000425093 1451 ntBASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.1■□□□□ 0.49
KRTCAP3Q53RY4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 AC004264.1-201ENST00000608354 794 ntBASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRTCAP3Q53RY4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRTCAP3Q53RY4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRTCAP3Q53RY4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRTCAP3Q53RY4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRTCAP3Q53RY4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
KRTCAP3Q53RY4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRTCAP3Q53RY4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
KRTCAP3Q53RY4 AC121338.2-201ENST00000622535 1744 ntBASIC18.08■□□□□ 0.48
KRTCAP3Q53RY4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
KRTCAP3Q53RY4 Z98882.1-201ENST00000622160 2253 ntBASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 HTR7P1-201ENST00000538670 1336 ntBASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 AL355355.2-201ENST00000442321 338 ntBASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.07■□□□□ 0.48
KRTCAP3Q53RY4 AF186192.3-201ENST00000583427 947 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms