Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC133041.1-202ENST00000642053 222 ntBASIC26.41■■□□□ 1.82
NCBP3Q53F19 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC26.41■■□□□ 1.82
NCBP3Q53F19 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
NCBP3Q53F19 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC26.41■■□□□ 1.82
NCBP3Q53F19 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 KRT8P17-201ENST00000453110 1448 ntBASIC26.4■■□□□ 1.82
NCBP3Q53F19 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 ID1-201ENST00000376105 1233 ntBASIC26.4■■□□□ 1.82
NCBP3Q53F19 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AC069152.1-201ENST00000438030 544 ntBASIC26.4■■□□□ 1.82
NCBP3Q53F19 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AL138781.1-201ENST00000566567 1274 ntBASIC26.4■■□□□ 1.82
NCBP3Q53F19 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 BX119927.1-201ENST00000636596 1552 ntBASIC26.4■■□□□ 1.82
NCBP3Q53F19 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
NCBP3Q53F19 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.39■■□□□ 1.82
NCBP3Q53F19 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
NCBP3Q53F19 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCBP3Q53F19 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
NCBP3Q53F19 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
NCBP3Q53F19 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
NCBP3Q53F19 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NCBP3Q53F19 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
NCBP3Q53F19 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NCBP3Q53F19 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NCBP3Q53F19 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NCBP3Q53F19 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 SERPINH1P1-201ENST00000419794 1249 ntBASIC26.38■■□□□ 1.81
NCBP3Q53F19 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 RN7SL371P-201ENST00000578099 267 ntBASIC26.38■■□□□ 1.81
NCBP3Q53F19 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NCBP3Q53F19 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.38■■□□□ 1.81
NCBP3Q53F19 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NCBP3Q53F19 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
NCBP3Q53F19 AC092667.1-201ENST00000434301 2586 ntBASIC26.37■■□□□ 1.81
NCBP3Q53F19 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC26.37■■□□□ 1.81
NCBP3Q53F19 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.37■■□□□ 1.81
NCBP3Q53F19 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.37■■□□□ 1.81
NCBP3Q53F19 AC097658.1-201ENST00000475555 843 ntBASIC26.37■■□□□ 1.81
NCBP3Q53F19 KRT8P20-201ENST00000423953 1409 ntBASIC26.37■■□□□ 1.81
NCBP3Q53F19 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
NCBP3Q53F19 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC26.37■■□□□ 1.81
NCBP3Q53F19 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.36■■□□□ 1.81
NCBP3Q53F19 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.36■■□□□ 1.81
NCBP3Q53F19 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.36■■□□□ 1.81
NCBP3Q53F19 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.36■■□□□ 1.81
NCBP3Q53F19 HLA-B-256ENST00000639848 1089 ntBASIC26.36■■□□□ 1.81
NCBP3Q53F19 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NCBP3Q53F19 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
NCBP3Q53F19 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
NCBP3Q53F19 CRK-204ENST00000574295 1391 ntTSL 5 BASIC26.35■■□□□ 1.81
NCBP3Q53F19 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.35■■□□□ 1.81
NCBP3Q53F19 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
NCBP3Q53F19 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NCBP3Q53F19 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms