Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 RPS2P52-201ENST00000469610 820 ntBASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 MKRN4P-201ENST00000444706 1521 ntBASIC17.57■□□□□ 0.4
CHRFAM7AQ494W8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 AC121338.2-201ENST00000622535 1744 ntBASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 AC013268.1-206ENST00000638368 961 ntBASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 AC112229.1-201ENST00000639295 961 ntBASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRFAM7AQ494W8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 MIPEPP3-201ENST00000412105 444 ntBASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 DUSP5P2-201ENST00000426873 1033 ntBASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 KRT18P20-201ENST00000548986 1279 ntBASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 AL391422.3-201ENST00000603791 2761 ntBASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRFAM7AQ494W8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRFAM7AQ494W8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms