Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DPP3P2-201ENST00000416030 1696 ntBASIC19.46■□□□□ 0.71
PCDH1Q08174 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH1Q08174 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDH1Q08174 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.46■□□□□ 0.71
PCDH1Q08174 CDCA4P2-201ENST00000441182 718 ntBASIC19.46■□□□□ 0.71
PCDH1Q08174 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH1Q08174 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH1Q08174 AC073111.5-205ENST00000641717 521 ntBASIC19.46■□□□□ 0.71
PCDH1Q08174 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 PTBP1P-201ENST00000554374 1601 ntBASIC19.46■□□□□ 0.71
PCDH1Q08174 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PCDH1Q08174 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH1Q08174 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH1Q08174 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH1Q08174 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH1Q08174 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH1Q08174 SMG8-203ENST00000578922 2178 ntBASIC19.45■□□□□ 0.7
PCDH1Q08174 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
PCDH1Q08174 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH1Q08174 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH1Q08174 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.45■□□□□ 0.7
PCDH1Q08174 AC005181.1-201ENST00000604782 1256 ntBASIC19.45■□□□□ 0.7
PCDH1Q08174 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH1Q08174 IKBKGP1-201ENST00000612193 1073 ntBASIC19.45■□□□□ 0.7
PCDH1Q08174 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH1Q08174 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH1Q08174 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH1Q08174 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDH1Q08174 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDH1Q08174 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH1Q08174 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH1Q08174 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.44■□□□□ 0.7
PCDH1Q08174 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PCDH1Q08174 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.44■□□□□ 0.7
PCDH1Q08174 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PCDH1Q08174 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH1Q08174 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 TCF3P1-201ENST00000423021 1937 ntBASIC19.43■□□□□ 0.7
PCDH1Q08174 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PCDH1Q08174 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 AL137784.2-201ENST00000607332 1000 ntBASIC19.43■□□□□ 0.7
PCDH1Q08174 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.43■□□□□ 0.7
PCDH1Q08174 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.43■□□□□ 0.7
PCDH1Q08174 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PCDH1Q08174 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH1Q08174 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PCDH1Q08174 BX119927.1-201ENST00000636596 1552 ntBASIC19.42■□□□□ 0.7
PCDH1Q08174 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PCDH1Q08174 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH1Q08174 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH1Q08174 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.42■□□□□ 0.7
PCDH1Q08174 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
PCDH1Q08174 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PCDH1Q08174 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms