Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 YMR141W-AYMR141W-A 225 nt2.16□□□□□ -2.06
HRD3Q05787 YBR064WYBR064W 429 nt2.16□□□□□ -2.06
HRD3Q05787 UFD4YKL010C 4452 nt2.15□□□□□ -2.07
HRD3Q05787 SEC16YPL085W 6588 nt2.15□□□□□ -2.07
HRD3Q05787 CFT2YLR115W 2580 nt2.15□□□□□ -2.07
HRD3Q05787 SET2YJL168C 2202 nt2.15□□□□□ -2.07
HRD3Q05787 TOR2YKL203C 7425 nt2.15□□□□□ -2.07
HRD3Q05787 MGM1YOR211C 2646 nt2.14□□□□□ -2.07
HRD3Q05787 MRP10YDL045W-A 288 nt2.14□□□□□ -2.07
HRD3Q05787 YMR307C-AYMR307C-A 195 nt2.14□□□□□ -2.07
HRD3Q05787 YOR394C-AYOR394C-A 168 nt2.14□□□□□ -2.07
HRD3Q05787 SLM1YIL105C 2061 nt2.14□□□□□ -2.07
HRD3Q05787 SWI6YLR182W 2412 nt2.13□□□□□ -2.07
HRD3Q05787 MVP1YMR004W 1536 nt2.13□□□□□ -2.07
HRD3Q05787 GYP5YPL249C 2685 nt2.13□□□□□ -2.07
HRD3Q05787 TRX1YLR043C 312 nt2.13□□□□□ -2.07
HRD3Q05787 YPR002C-AYPR002C-A 198 nt2.13□□□□□ -2.07
HRD3Q05787 SCW11YGL028C 1629 nt2.13□□□□□ -2.07
HRD3Q05787 PXA2YKL188C 2562 nt2.12□□□□□ -2.07
HRD3Q05787 BRE1YDL074C 2103 nt2.12□□□□□ -2.07
HRD3Q05787 snR55snR55 98 nt2.12□□□□□ -2.07
HRD3Q05787 YLR255CYLR255C 354 nt2.12□□□□□ -2.07
HRD3Q05787 CYB5YNL111C 363 nt2.12□□□□□ -2.07
HRD3Q05787 YNL114CYNL114C 372 nt2.12□□□□□ -2.07
HRD3Q05787 YFR016CYFR016C 3702 nt2.12□□□□□ -2.07
HRD3Q05787 SIR4YDR227W 4077 nt2.12□□□□□ -2.07
HRD3Q05787 KOG1YHR186C 4674 nt2.12□□□□□ -2.07
HRD3Q05787 UBR1YGR184C 5853 nt2.12□□□□□ -2.07
HRD3Q05787 ZRG8YER033C 3231 nt2.11□□□□□ -2.07
HRD3Q05787 YOL098CYOL098C 3114 nt2.11□□□□□ -2.07
HRD3Q05787 NUP100YKL068W 2880 nt2.11□□□□□ -2.07
HRD3Q05787 SWI5YDR146C 2130 nt2.11□□□□□ -2.07
HRD3Q05787 TRS130YMR218C 3309 nt2.1□□□□□ -2.07
HRD3Q05787 YRB1YDR002W 606 nt2.1□□□□□ -2.07
HRD3Q05787 YJL135WYJL135W 318 nt2.1□□□□□ -2.07
HRD3Q05787 YNL198CYNL198C 303 nt2.1□□□□□ -2.07
HRD3Q05787 IES4YOR189W 351 nt2.1□□□□□ -2.07
HRD3Q05787 IRC8YJL051W 2469 nt2.1□□□□□ -2.07
HRD3Q05787 YDR286CYDR286C 345 nt2.09□□□□□ -2.07
HRD3Q05787 YNL028WYNL028W 318 nt2.09□□□□□ -2.07
HRD3Q05787 DGR1YNL130C-A 147 nt2.09□□□□□ -2.07
HRD3Q05787 RPB10YOR210W 213 nt2.09□□□□□ -2.07
HRD3Q05787 MUK1YPL070W 1839 nt2.09□□□□□ -2.08
HRD3Q05787 YCK3YER123W 1575 nt2.09□□□□□ -2.08
HRD3Q05787 RPH1YER169W 2391 nt2.09□□□□□ -2.08
HRD3Q05787 INP2YMR163C 2118 nt2.08□□□□□ -2.08
HRD3Q05787 YCR043CYCR043C 384 nt2.07□□□□□ -2.08
HRD3Q05787 PAU8YAL068C 363 nt2.07□□□□□ -2.08
HRD3Q05787 CSE2YNR010W 450 nt2.07□□□□□ -2.08
HRD3Q05787 PAU20YOL161C 363 nt2.07□□□□□ -2.08
HRD3Q05787 LCD1YDR499W 2244 nt2.07□□□□□ -2.08
HRD3Q05787 MNE1YOR350C 1992 nt2.07□□□□□ -2.08
HRD3Q05787 SLY1YDR189W 2001 nt2.07□□□□□ -2.08
HRD3Q05787 PLC1YPL268W 2610 nt2.06□□□□□ -2.08
HRD3Q05787 GIP3YPL137C 3831 nt2.06□□□□□ -2.08
HRD3Q05787 NPR2YEL062W 1848 nt2.06□□□□□ -2.08
HRD3Q05787 SSS1YDR086C 243 nt2.06□□□□□ -2.08
HRD3Q05787 TIM9YEL020W-A 264 nt2.06□□□□□ -2.08
HRD3Q05787 YER172C-AYER172C-A 381 nt2.06□□□□□ -2.08
HRD3Q05787 YGL007C-AYGL007C-A 87 nt2.06□□□□□ -2.08
HRD3Q05787 YGL052WYGL052W 306 nt2.06□□□□□ -2.08
HRD3Q05787 YHR073W-AYHR073W-A 177 nt2.06□□□□□ -2.08
HRD3Q05787 APQ12YIL040W 417 nt2.06□□□□□ -2.08
HRD3Q05787 YJL197C-AYJL197C-A 282 nt2.06□□□□□ -2.08
HRD3Q05787 YMR045CYMR045C 5268 nt2.06□□□□□ -2.08
HRD3Q05787 VIK1YPL253C 1944 nt2.05□□□□□ -2.08
HRD3Q05787 YCR102W-AYCR102W-A 198 nt2.05□□□□□ -2.08
HRD3Q05787 PFD1YJL179W 330 nt2.05□□□□□ -2.08
HRD3Q05787 RAV1YJR033C 4074 nt2.05□□□□□ -2.08
HRD3Q05787 RFX1YLR176C 2436 nt2.05□□□□□ -2.08
HRD3Q05787 snR72snR72 98 nt2.04□□□□□ -2.08
HRD3Q05787 PAU2YEL049W 363 nt2.04□□□□□ -2.08
HRD3Q05787 RPS17AYML024W 411 nt2.04□□□□□ -2.08
HRD3Q05787 YMR172C-AYMR172C-A 384 nt2.04□□□□□ -2.08
HRD3Q05787 SPT21YMR179W 2277 nt2.04□□□□□ -2.08
HRD3Q05787 YMR321CYMR321C 318 nt2.04□□□□□ -2.08
HRD3Q05787 YHR214C-BYHR214C-B 5382 nt2.04□□□□□ -2.08
HRD3Q05787 TOF1YNL273W 3717 nt2.03□□□□□ -2.08
HRD3Q05787 PAM16YJL104W 450 nt2.03□□□□□ -2.08
HRD3Q05787 PAU18YLL064C 363 nt2.03□□□□□ -2.08
HRD3Q05787 YLR120W-AYLR120W-A 102 nt2.03□□□□□ -2.08
HRD3Q05787 PAU6YNR076W 363 nt2.03□□□□□ -2.08
HRD3Q05787 MDM20YOL076W 2391 nt2.03□□□□□ -2.08
HRD3Q05787 IRR1YIL026C 3453 nt2.03□□□□□ -2.09
HRD3Q05787 MET18YIL128W 3099 nt2.02□□□□□ -2.09
HRD3Q05787 ISD11YER048W-A 285 nt2.02□□□□□ -2.09
HRD3Q05787 GPG1YGL121C 381 nt2.02□□□□□ -2.09
HRD3Q05787 YHR180W-AYHR180W-A 183 nt2.02□□□□□ -2.09
HRD3Q05787 YKL165C-AYKL165C-A 234 nt2.02□□□□□ -2.09
HRD3Q05787 YLR294CYLR294C 330 nt2.02□□□□□ -2.09
HRD3Q05787 YMR230W-AYMR230W-A 189 nt2.02□□□□□ -2.09
HRD3Q05787 YOR015WYOR015W 360 nt2.02□□□□□ -2.09
HRD3Q05787 YCL046WYCL046W 324 nt2.02□□□□□ -2.09
HRD3Q05787 LYS14YDR034C 2373 nt2.02□□□□□ -2.09
HRD3Q05787 TFC8YPL007C 1767 nt2.02□□□□□ -2.09
HRD3Q05787 TRL1YJL087C 2484 nt2.01□□□□□ -2.09
HRD3Q05787 YLL032CYLL032C 2478 nt2.01□□□□□ -2.09
HRD3Q05787 MMS22YLR320W 4365 nt2.01□□□□□ -2.09
HRD3Q05787 INA22YIR024C 651 nt2.01□□□□□ -2.09
HRD3Q05787 YLR154W-AYLR154W-A 186 nt2.01□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 90.9 ms