Protein–RNA interactions for Protein: Q04214

TY1B-MR1, Transposon Ty1-MR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-MR1Q04214 COX3Q0275 810 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 RPL26AYLR344W 384 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 SWM2YNR004W 441 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 VPS28YPL065W 729 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 YPR142CYPR142C 564 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 YHL009W-BYHL009W-B 5409 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 NOP9YJL010C 2001 nt-0.22□□□□□ -2.44
TY1B-MR1Q04214 YDR114CYDR114C 303 nt-0.22□□□□□ -2.45
TY1B-MR1Q04214 CRG1YHR209W 876 nt-0.22□□□□□ -2.45
TY1B-MR1Q04214 YKL115CYKL115C 393 nt-0.22□□□□□ -2.45
TY1B-MR1Q04214 PRP42YDR235W 1635 nt-0.23□□□□□ -2.45
TY1B-MR1Q04214 YPR172WYPR172W 603 nt-0.23□□□□□ -2.45
TY1B-MR1Q04214 RTC6YPL183W-A 282 nt-0.24□□□□□ -2.45
TY1B-MR1Q04214 YBL068W-AYBL068W-A 237 nt-0.24□□□□□ -2.45
TY1B-MR1Q04214 YOR186C-AYOR186C-A 210 nt-0.24□□□□□ -2.45
TY1B-MR1Q04214 snR46snR46 197 nt-0.25□□□□□ -2.45
TY1B-MR1Q04214 SBH2YER019C-A 267 nt-0.26□□□□□ -2.45
TY1B-MR1Q04214 YJL156W-AYJL156W-A 222 nt-0.26□□□□□ -2.45
TY1B-MR1Q04214 PHO80YOL001W 882 nt-0.26□□□□□ -2.45
TY1B-MR1Q04214 PMP1YCR024C-A 123 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 TFB5YDR079C-A 219 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 YGR042WYGR042W 816 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 RPL42BYHR141C 321 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 RFA3YJL173C 369 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 CCE1YKL011C 1062 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 RPL42AYNL162W 321 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 YPL080CYPL080C 327 nt-0.27□□□□□ -2.45
TY1B-MR1Q04214 YKL136WYKL136W 399 nt-0.28□□□□□ -2.45
TY1B-MR1Q04214 RCO1YMR075W 2055 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 UPS1YLR193C 528 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 RRT1YBL048W 312 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 GPI2YPL076W 843 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 LCD1YDR499W 2244 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 GOS1YHL031C 672 nt-0.29□□□□□ -2.46
TY1B-MR1Q04214 RTR2YDR066C 591 nt-0.3□□□□□ -2.46
TY1B-MR1Q04214 YDR194W-AYDR194W-A 153 nt-0.3□□□□□ -2.46
TY1B-MR1Q04214 YLR252WYLR252W 306 nt-0.3□□□□□ -2.46
TY1B-MR1Q04214 RAD34YDR314C 2079 nt-0.31□□□□□ -2.46
TY1B-MR1Q04214 YDL068WYDL068W 330 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 TIM10YHR005C-A 282 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 SMD2YLR275W 333 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 YEL010WYEL010W 351 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 MMS2YGL087C 414 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 GPG1YGL121C 381 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 RPS16AYMR143W 432 nt-0.32□□□□□ -2.46
TY1B-MR1Q04214 YOR169CYOR169C 465 nt-0.33□□□□□ -2.46
TY1B-MR1Q04214 SPO23YBR250W 1572 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 HNT1YDL125C 477 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 YER158W-AYER158W-A 216 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 YJL086CYJL086C 369 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 RPS27AYKL156W 249 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 YNL150WYNL150W 408 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 LEE1YPL054W 906 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 YPL225WYPL225W 441 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 ATP15YPL271W 189 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 REF2YDR195W 1602 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 YBR071WYBR071W 636 nt-0.34□□□□□ -2.46
TY1B-MR1Q04214 BI3Q0115 1554 nt-0.35□□□□□ -2.47
TY1B-MR1Q04214 LSM4YER112W 564 nt-0.35□□□□□ -2.47
TY1B-MR1Q04214 YHR139C-AYHR139C-A 312 nt-0.35□□□□□ -2.47
TY1B-MR1Q04214 YNL211CYNL211C 261 nt-0.35□□□□□ -2.47
TY1B-MR1Q04214 FYV10YIL097W 1551 nt-0.35□□□□□ -2.47
TY1B-MR1Q04214 YDL187CYDL187C 330 nt-0.36□□□□□ -2.47
TY1B-MR1Q04214 YLR101CYLR101C 396 nt-0.36□□□□□ -2.47
TY1B-MR1Q04214 SRP14YDL092W 441 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 AI5_BETAQ0075 1065 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 PRP21YJL203W 843 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 HOT13YKL084W 351 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 YNL050CYNL050C 813 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 YCL002CYCL002C 792 nt-0.37□□□□□ -2.47
TY1B-MR1Q04214 NUP82YJL061W 2142 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 INP2YMR163C 2118 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 KAR1YNL188W 1302 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 ZIP1YDR285W 2628 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 YDR029WYDR029W 315 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 YHL042WYHL042W 453 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 YJL127W-AYJL127W-A 117 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 AFB1YLR040C 675 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 COX8YLR395C 237 nt-0.38□□□□□ -2.47
TY1B-MR1Q04214 MIC19YFR011C 513 nt-0.4□□□□□ -2.47
TY1B-MR1Q04214 ARV1YLR242C 966 nt-0.4□□□□□ -2.47
TY1B-MR1Q04214 YOP1YPR028W 543 nt-0.4□□□□□ -2.47
TY1B-MR1Q04214 YHR028W-AYHR028W-A 321 nt-0.4□□□□□ -2.47
TY1B-MR1Q04214 CMS1YLR003C 876 nt-0.4□□□□□ -2.47
TY1B-MR1Q04214 RAD61YDR014W 1944 nt-0.41□□□□□ -2.47
TY1B-MR1Q04214 YIR018C-AYIR018C-A 138 nt-0.41□□□□□ -2.47
TY1B-MR1Q04214 EFR3YMR212C 2349 nt-0.41□□□□□ -2.48
TY1B-MR1Q04214 YDR182W-AYDR182W-A 204 nt-0.42□□□□□ -2.48
TY1B-MR1Q04214 YDR290WYDR290W 330 nt-0.42□□□□□ -2.48
TY1B-MR1Q04214 RPM2YML091C 3609 nt-0.42□□□□□ -2.48
TY1B-MR1Q04214 snR8snR8 190 nt-0.42□□□□□ -2.48
TY1B-MR1Q04214 YBR184WYBR184W 1572 nt-0.42□□□□□ -2.48
TY1B-MR1Q04214 YJR011CYJR011C 786 nt-0.43□□□□□ -2.48
TY1B-MR1Q04214 CSM4YPL200W 471 nt-0.43□□□□□ -2.48
TY1B-MR1Q04214 YGL042CYGL042C 306 nt-0.44□□□□□ -2.48
TY1B-MR1Q04214 THG1YGR024C 714 nt-0.44□□□□□ -2.48
TY1B-MR1Q04214 YPR170W-AYPR170W-A 186 nt-0.44□□□□□ -2.48
TY1B-MR1Q04214 CUL3YGR003W 2235 nt-0.44□□□□□ -2.48
TY1B-MR1Q04214 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
TY1B-MR1Q04214 SOV1YMR066W 2697 nt-0.45□□□□□ -2.48
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms